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GNOme

GNOme - Glycan Naming and Subsumption Ontology.

GNOme Navigators

Subsumption Navigator

Notation

  1. Archetype glycans marked with “[A]” (configure using settings)
  2. Strict subsumption relationships (mass-preserving) are shown as solid edges.
  3. Non-strict subsumption relationships (not mass-preserving) are shown as dashed edges.

Browsing

  1. Use mouse wheel to zoom in/out.
  2. Double click on glycan image to change focus.
  3. Right click to see external resources about choosing glycan.

Go back to Topology/Composition Selection Tool

Simply click on “Upward Arrow” on top left.

Ellipsis

The ellipsis on the right hand side indicate there are more glycans are subsumed. The number below it indicate how many glycans were subsumed.

Example

Subsumption Navigator for topology G59480BZ in structure browser.
Subsumption Navigator for composition G27391WQ in composition browser.
Subsumption Navigator for composition G27391WQ in structure browser.

Click on it to jump to GNOme repository.