GlyTouCan provides stable accessions for glycans described at varyious degrees of characterization, including compositions (no linkage) and topologies (no carbon bond positions or anomeric configurations).
GNOme organizes these stable accessions
- for interactive browsing,
- for text-based searching, and
- for automated reasoning
- with well-defined characterization levels.
GNOme is an OBO Foundry ontology.
Use the GNOme Glycan Structure Browser to find glycan structures by composition, topology, and subsumption relationships.
Use the GNOme Glycan Composition Browser to find glycan compositions by composition and subsumption relationships.
GNOme restrictions support speciifc subsets of GlyTouCan accessions:
- GlyGen: Structure Browser, Composition Browser.
- GlycanData: Structure Browser, Composition Browser.
- BCSDB: Structure Browser, Composition Browser.
GNOme Glycan Synonyms support quick lookup of commonly used composition strings and other semantic glycan names.
The current release of GNOme is always available at the permanent URLs:
Tagged and versioned releases are also available.
GNOme input data-files, resulting ontologies, and interactive widgets are managed at GitHub.
Please submit issues, suggestions, corrections to the issue tracker.